Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.81■□□□□ 0.12
CASC4Q6P4E1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 CICP23-201ENST00000605013 2741 ntBASIC15.81■□□□□ 0.12
CASC4Q6P4E1 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CASC4Q6P4E1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 SERBP1P3-201ENST00000459980 809 ntBASIC15.8■□□□□ 0.12
CASC4Q6P4E1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.8■□□□□ 0.12
CASC4Q6P4E1 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 AC254562.1-201ENST00000417586 456 ntBASIC15.79■□□□□ 0.12
CASC4Q6P4E1 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 AL596442.2-201ENST00000610240 980 ntBASIC15.79■□□□□ 0.12
CASC4Q6P4E1 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
CASC4Q6P4E1 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms