Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TPM3P8-201ENST00000330554 643 ntBASIC21.12■□□□□ 0.97
CDCA8Q53HL2 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 FAM197Y7-201ENST00000432892 766 ntBASIC21.12■□□□□ 0.97
CDCA8Q53HL2 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 AC245100.3-201ENST00000441281 285 ntBASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 AHRR-211ENST00000515206 462 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 NAA38-206ENST00000576384 424 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 MIR4259-201ENST00000584466 101 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 Six3os1_5.1-201ENST00000611000 271 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC138951.2-201ENST00000623455 1161 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC006453.4-201ENST00000636949 1252 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC008687.7-202ENST00000637404 953 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC008741.2-201ENST00000612792 3115 ntBASIC21.11■□□□□ 0.97
CDCA8Q53HL2 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CDCA8Q53HL2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCA8Q53HL2 MST1L-201ENST00000442552 2185 ntBASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms