Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 HCG27-204ENST00000424675 895 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 PSMD4P1-201ENST00000433951 1109 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 FAM90A2P-201ENST00000511144 1395 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 FAM90A25P-201ENST00000528404 1395 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC106820.3-201ENST00000561653 397 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AL132994.2-201ENST00000603120 687 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 AC011247.3-201ENST00000603297 438 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 LINC00431-202ENST00000636375 159 ntBASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RSPO4Q2I0M5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AC134407.2-201ENST00000625089 1978 ntBASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AP001282.1-201ENST00000531301 1499 ntBASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 TNRC18P3-201ENST00000441896 2691 ntBASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AC024293.1-201ENST00000467930 498 ntBASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 MME-218ENST00000625667 363 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RSPO4Q2I0M5 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 GGT3P-204ENST00000453783 1664 ntBASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 WT1-209ENST00000530998 2421 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 PCDHB19P-201ENST00000570871 2371 ntBASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 AC008741.2-201ENST00000612792 3115 ntBASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RSPO4Q2I0M5 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms