Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD47Q08722 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.4□□□□□ -0.1
CD47Q08722 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.4□□□□□ -0.1
CD47Q08722 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD47Q08722 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.4□□□□□ -0.1
CD47Q08722 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CD47Q08722 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
CD47Q08722 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD47Q08722 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CD47Q08722 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.39□□□□□ -0.11
CD47Q08722 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.39□□□□□ -0.11
CD47Q08722 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.39□□□□□ -0.11
CD47Q08722 RNA5SP410-201ENST00000516285 106 ntBASIC14.39□□□□□ -0.11
CD47Q08722 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.39□□□□□ -0.11
CD47Q08722 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.39□□□□□ -0.11
CD47Q08722 AC243562.2-201ENST00000561247 970 ntBASIC14.39□□□□□ -0.11
CD47Q08722 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.39□□□□□ -0.11
CD47Q08722 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CD47Q08722 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
CD47Q08722 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CD47Q08722 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.39□□□□□ -0.11
CD47Q08722 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 AL691432.1-201ENST00000596308 1422 ntBASIC14.39□□□□□ -0.11
CD47Q08722 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CD47Q08722 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CD47Q08722 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.38□□□□□ -0.11
CD47Q08722 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 ADH5P3-201ENST00000433842 1137 ntBASIC14.38□□□□□ -0.11
CD47Q08722 ACTG1P14-201ENST00000446382 1122 ntBASIC14.38□□□□□ -0.11
CD47Q08722 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.38□□□□□ -0.11
CD47Q08722 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.38□□□□□ -0.11
CD47Q08722 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.38□□□□□ -0.11
CD47Q08722 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
CD47Q08722 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.38□□□□□ -0.11
CD47Q08722 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC14.38□□□□□ -0.11
CD47Q08722 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CD47Q08722 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms