Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AC135586.1-201ENST00000539323 574 ntBASIC14.9□□□□□ -0.02
PCDH1Q08174 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.9□□□□□ -0.02
PCDH1Q08174 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.9□□□□□ -0.02
PCDH1Q08174 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
PCDH1Q08174 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
PCDH1Q08174 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 BASP1P1-201ENST00000430708 665 ntBASIC14.89□□□□□ -0.03
PCDH1Q08174 AL589987.1-201ENST00000453380 819 ntBASIC14.89□□□□□ -0.03
PCDH1Q08174 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH1Q08174 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
PCDH1Q08174 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.89□□□□□ -0.03
PCDH1Q08174 RRP7BP-205ENST00000566851 833 ntBASIC14.89□□□□□ -0.03
PCDH1Q08174 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.89□□□□□ -0.03
PCDH1Q08174 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
PCDH1Q08174 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 AP000845.1-201ENST00000581677 2131 ntBASIC14.89□□□□□ -0.03
PCDH1Q08174 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
PCDH1Q08174 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC14.89□□□□□ -0.03
PCDH1Q08174 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
PCDH1Q08174 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 AP002414.2-201ENST00000591780 3365 ntBASIC14.88□□□□□ -0.03
PCDH1Q08174 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
PCDH1Q08174 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
PCDH1Q08174 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.88□□□□□ -0.03
PCDH1Q08174 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
PCDH1Q08174 MEP1AP4-201ENST00000423244 1087 ntBASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms