Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP1Q04837 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP1Q04837 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 AC018712.1-201ENST00000455767 687 ntBASIC13.07□□□□□ -0.32
SSBP1Q04837 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
SSBP1Q04837 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC13.07□□□□□ -0.32
SSBP1Q04837 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.07□□□□□ -0.32
SSBP1Q04837 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
SSBP1Q04837 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
SSBP1Q04837 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 ST20-AS1-201ENST00000560255 4223 ntBASIC13.07□□□□□ -0.32
SSBP1Q04837 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.07□□□□□ -0.32
SSBP1Q04837 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.07□□□□□ -0.32
SSBP1Q04837 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
SSBP1Q04837 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
SSBP1Q04837 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 AC002056.1-201ENST00000395613 760 ntBASIC13.06□□□□□ -0.32
SSBP1Q04837 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP1Q04837 TMEM198B-204ENST00000484016 896 ntBASIC13.06□□□□□ -0.32
SSBP1Q04837 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13.06□□□□□ -0.32
SSBP1Q04837 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 AL138918.1-201ENST00000568306 659 ntBASIC13.06□□□□□ -0.32
SSBP1Q04837 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 AL358472.4-201ENST00000633140 710 ntBASIC13.06□□□□□ -0.32
SSBP1Q04837 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
SSBP1Q04837 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.06□□□□□ -0.32
SSBP1Q04837 AC015656.1-201ENST00000624209 3578 ntBASIC13.06□□□□□ -0.32
SSBP1Q04837 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.06□□□□□ -0.32
SSBP1Q04837 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
SSBP1Q04837 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
SSBP1Q04837 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.05□□□□□ -0.32
SSBP1Q04837 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
SSBP1Q04837 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms