Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 AC068418.2-201ENST00000577309 3703 ntBASIC17.23■□□□□ 0.35
ASIC1P78348 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC17.23■□□□□ 0.35
ASIC1P78348 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.23■□□□□ 0.35
ASIC1P78348 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
ASIC1P78348 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
ASIC1P78348 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
ASIC1P78348 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.22■□□□□ 0.35
ASIC1P78348 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
ASIC1P78348 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 MRPS18AP1-201ENST00000414458 589 ntBASIC17.22■□□□□ 0.35
ASIC1P78348 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.22■□□□□ 0.35
ASIC1P78348 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.22■□□□□ 0.35
ASIC1P78348 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 CYMP-203ENST00000474680 1263 ntBASIC17.22■□□□□ 0.35
ASIC1P78348 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.22■□□□□ 0.35
ASIC1P78348 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 AC004790.1-201ENST00000612686 536 ntBASIC17.22■□□□□ 0.35
ASIC1P78348 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.22■□□□□ 0.35
ASIC1P78348 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
ASIC1P78348 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC17.22■□□□□ 0.35
ASIC1P78348 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
ASIC1P78348 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
ASIC1P78348 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
ASIC1P78348 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
ASIC1P78348 CICP24-201ENST00000605464 2705 ntBASIC17.21■□□□□ 0.35
ASIC1P78348 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
ASIC1P78348 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
ASIC1P78348 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms