Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
SEC61A1P61619 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.61□□□□□ -0.23
SEC61A1P61619 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SEC61A1P61619 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SEC61A1P61619 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SEC61A1P61619 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC010327.5-201ENST00000586923 3061 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SEC61A1P61619 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
SEC61A1P61619 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SEC61A1P61619 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
SEC61A1P61619 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC055876.3-201ENST00000431496 288 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 RNA5SP410-201ENST00000516285 106 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.6□□□□□ -0.23
SEC61A1P61619 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC140878.1-201ENST00000565277 250 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AC138649.4-201ENST00000612222 287 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.6□□□□□ -0.23
SEC61A1P61619 AL390754.1-201ENST00000619088 582 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 AL359183.1-201ENST00000623796 2132 ntBASIC13.6□□□□□ -0.23
SEC61A1P61619 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SEC61A1P61619 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.6□□□□□ -0.23
SEC61A1P61619 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.6□□□□□ -0.23
SEC61A1P61619 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.59□□□□□ -0.23
SEC61A1P61619 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.59□□□□□ -0.23
SEC61A1P61619 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
SEC61A1P61619 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms