Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP54P61011 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP54P61011 AC007551.1-201ENST00000457394 519 ntBASIC15.25■□□□□ 0.03
SRP54P61011 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC15.25■□□□□ 0.03
SRP54P61011 AC022137.2-201ENST00000503482 481 ntBASIC15.25■□□□□ 0.03
SRP54P61011 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.25■□□□□ 0.03
SRP54P61011 AC025181.2-201ENST00000606994 802 ntBASIC15.25■□□□□ 0.03
SRP54P61011 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.25■□□□□ 0.03
SRP54P61011 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.25■□□□□ 0.03
SRP54P61011 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP54P61011 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.25■□□□□ 0.03
SRP54P61011 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP54P61011 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.25■□□□□ 0.03
SRP54P61011 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
SRP54P61011 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
SRP54P61011 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
SRP54P61011 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
SRP54P61011 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.24■□□□□ 0.03
SRP54P61011 AC106760.1-201ENST00000508690 800 ntBASIC15.24■□□□□ 0.03
SRP54P61011 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC15.24■□□□□ 0.03
SRP54P61011 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC15.24■□□□□ 0.03
SRP54P61011 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.24■□□□□ 0.03
SRP54P61011 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.24■□□□□ 0.03
SRP54P61011 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC15.24■□□□□ 0.03
SRP54P61011 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SRP54P61011 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
SRP54P61011 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP54P61011 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP54P61011 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP54P61011 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SRP54P61011 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
SRP54P61011 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC15.23■□□□□ 0.03
SRP54P61011 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.23■□□□□ 0.03
SRP54P61011 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
SRP54P61011 AC016694.1-201ENST00000434179 700 ntBASIC15.23■□□□□ 0.03
SRP54P61011 FTH1P14-201ENST00000482930 551 ntBASIC15.23■□□□□ 0.03
SRP54P61011 AP005019.2-201ENST00000615104 511 ntBASIC15.23■□□□□ 0.03
SRP54P61011 BX539320.1-201ENST00000623759 877 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms