Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.2
CLRN1P58418 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLRN1P58418 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.83□□□□□ -0.2
CLRN1P58418 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.83□□□□□ -0.2
CLRN1P58418 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLRN1P58418 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.83□□□□□ -0.2
CLRN1P58418 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.83□□□□□ -0.2
CLRN1P58418 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLRN1P58418 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLRN1P58418 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CLRN1P58418 TSSK5P-201ENST00000423978 907 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 PMS2P2-201ENST00000425039 1128 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 AC114501.2-201ENST00000439631 535 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 AC009477.1-201ENST00000452936 217 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 AC135586.1-201ENST00000539323 574 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.82□□□□□ -0.2
CLRN1P58418 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 CICP11-201ENST00000434745 2827 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AC022144.1-201ENST00000602255 1580 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AC138969.2-201ENST00000532739 9932 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 MST1L-201ENST00000442552 2185 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLRN1P58418 AC091951.1-201ENST00000512854 2465 ntBASIC13.82□□□□□ -0.2
CLRN1P58418 RERG-209ENST00000546331 1383 ntTSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.82□□□□□ -0.2
CLRN1P58418 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
CLRN1P58418 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.81□□□□□ -0.2
CLRN1P58418 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
CLRN1P58418 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 TCAF2P1-201ENST00000291129 2421 ntBASIC13.81□□□□□ -0.2
CLRN1P58418 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
CLRN1P58418 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLRN1P58418 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.81□□□□□ -0.2
CLRN1P58418 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.81□□□□□ -0.2
CLRN1P58418 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.81□□□□□ -0.2
CLRN1P58418 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLRN1P58418 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLRN1P58418 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.81□□□□□ -0.2
CLRN1P58418 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLRN1P58418 PRR29-204ENST00000577953 565 ntTSL 4 BASIC13.81□□□□□ -0.2
CLRN1P58418 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.81□□□□□ -0.2
CLRN1P58418 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.81□□□□□ -0.2
CLRN1P58418 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
CLRN1P58418 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC13.81□□□□□ -0.2
CLRN1P58418 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
CLRN1P58418 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms