Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MIR1909-201ENST00000411312 80 ntBASIC11.3□□□□□ -0.6
APOC4P55056 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.3□□□□□ -0.6
APOC4P55056 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 AMT-224ENST00000635808 1610 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 AC010491.1-201ENST00000563101 2797 ntBASIC11.3□□□□□ -0.6
APOC4P55056 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 KRT8P35-201ENST00000483942 1338 ntBASIC11.3□□□□□ -0.6
APOC4P55056 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC11.3□□□□□ -0.6
APOC4P55056 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
APOC4P55056 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.3□□□□□ -0.6
APOC4P55056 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC4P55056 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC4P55056 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 ZBTB12BP-201ENST00000314232 1122 ntBASIC11.29□□□□□ -0.6
APOC4P55056 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC11.29□□□□□ -0.6
APOC4P55056 AC022210.1-201ENST00000449856 793 ntBASIC11.29□□□□□ -0.6
APOC4P55056 AC007551.1-201ENST00000457394 519 ntBASIC11.29□□□□□ -0.6
APOC4P55056 GAPDHP40-201ENST00000505218 1006 ntBASIC11.29□□□□□ -0.6
APOC4P55056 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.29□□□□□ -0.6
APOC4P55056 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 COX11-210ENST00000639671 696 ntBASIC11.29□□□□□ -0.6
APOC4P55056 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC11.29□□□□□ -0.6
APOC4P55056 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
APOC4P55056 LRRC59-203ENST00000576448 1531 ntBASIC11.29□□□□□ -0.6
APOC4P55056 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
APOC4P55056 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
APOC4P55056 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
APOC4P55056 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
APOC4P55056 PRAL-201ENST00000624952 3286 ntBASIC11.28□□□□□ -0.6
APOC4P55056 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC11.28□□□□□ -0.6
APOC4P55056 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
APOC4P55056 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
APOC4P55056 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms