Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 AC009090.5-201ENST00000624886 2285 ntBASIC14.41□□□□□ -0.1
PSMD4P55036 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 AL121723.1-201ENST00000445194 1519 ntBASIC14.41□□□□□ -0.1
PSMD4P55036 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.41□□□□□ -0.1
PSMD4P55036 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.41□□□□□ -0.1
PSMD4P55036 AC004840.1-201ENST00000636359 365 ntBASIC14.41□□□□□ -0.1
PSMD4P55036 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.41□□□□□ -0.1
PSMD4P55036 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
PSMD4P55036 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PSMD4P55036 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 AC138035.3-201ENST00000622706 2791 ntBASIC14.4□□□□□ -0.1
PSMD4P55036 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 AC148477.4-201ENST00000613430 1793 ntBASIC14.4□□□□□ -0.1
PSMD4P55036 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PSMD4P55036 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.4□□□□□ -0.1
PSMD4P55036 KRT18P64-201ENST00000434946 1219 ntBASIC14.4□□□□□ -0.1
PSMD4P55036 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 DOC2GP-202ENST00000514950 1163 ntBASIC14.4□□□□□ -0.1
PSMD4P55036 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.4□□□□□ -0.1
PSMD4P55036 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.4□□□□□ -0.1
PSMD4P55036 AC036164.1-201ENST00000570544 333 ntBASIC14.4□□□□□ -0.1
PSMD4P55036 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
PSMD4P55036 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PSMD4P55036 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.4□□□□□ -0.1
PSMD4P55036 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.39□□□□□ -0.11
PSMD4P55036 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PSMD4P55036 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms