Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HMGCS2P54868 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 RN7SL774P-201ENST00000577467 290 ntBASIC17.61■□□□□ 0.41
HMGCS2P54868 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCS2P54868 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 AL645939.5-201ENST00000606834 243 ntBASIC17.61■□□□□ 0.41
HMGCS2P54868 AC091544.8-201ENST00000619490 361 ntBASIC17.61■□□□□ 0.41
HMGCS2P54868 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HMGCS2P54868 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCS2P54868 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HMGCS2P54868 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.61■□□□□ 0.41
HMGCS2P54868 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HMGCS2P54868 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HMGCS2P54868 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC17.6■□□□□ 0.41
HMGCS2P54868 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 GHSR-202ENST00000427970 912 ntBASIC17.6■□□□□ 0.41
HMGCS2P54868 AL133466.1-201ENST00000447582 150 ntBASIC17.6■□□□□ 0.41
HMGCS2P54868 RN7SL720P-201ENST00000488178 304 ntBASIC17.6■□□□□ 0.41
HMGCS2P54868 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC17.6■□□□□ 0.41
HMGCS2P54868 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC17.6■□□□□ 0.41
HMGCS2P54868 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
HMGCS2P54868 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC17.6■□□□□ 0.41
HMGCS2P54868 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HMGCS2P54868 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HMGCS2P54868 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC17.59■□□□□ 0.41
HMGCS2P54868 DPM3-202ENST00000368399 517 ntBASIC17.59■□□□□ 0.41
HMGCS2P54868 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 HINT2P1-201ENST00000419438 481 ntBASIC17.59■□□□□ 0.41
HMGCS2P54868 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 EID1-202ENST00000560490 584 ntTSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
HMGCS2P54868 AL023803.2-201ENST00000620080 638 ntBASIC17.59■□□□□ 0.41
HMGCS2P54868 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
HMGCS2P54868 CICP11-201ENST00000434745 2827 ntBASIC17.59■□□□□ 0.41
HMGCS2P54868 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
HMGCS2P54868 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HMGCS2P54868 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HMGCS2P54868 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS2P54868 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS2P54868 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HMGCS2P54868 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS2P54868 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS2P54868 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HMGCS2P54868 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HMGCS2P54868 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.58■□□□□ 0.41
HMGCS2P54868 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC17.58■□□□□ 0.41
HMGCS2P54868 ZBTB45P1-201ENST00000452761 1456 ntBASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms