Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 C18orf15-201ENST00000623680 2534 ntBASIC14.09□□□□□ -0.15
CENPAP49450 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.09□□□□□ -0.15
CENPAP49450 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.09□□□□□ -0.15
CENPAP49450 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
CENPAP49450 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CENPAP49450 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CENPAP49450 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC14.09□□□□□ -0.15
CENPAP49450 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.09□□□□□ -0.15
CENPAP49450 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.09□□□□□ -0.15
CENPAP49450 ALG1L8P-201ENST00000533887 760 ntBASIC14.09□□□□□ -0.15
CENPAP49450 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.09□□□□□ -0.15
CENPAP49450 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CENPAP49450 AC010327.4-202ENST00000591484 748 ntBASIC14.09□□□□□ -0.15
CENPAP49450 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.09□□□□□ -0.15
CENPAP49450 AC022145.2-201ENST00000598203 171 ntBASIC14.09□□□□□ -0.15
CENPAP49450 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.09□□□□□ -0.15
CENPAP49450 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.09□□□□□ -0.15
CENPAP49450 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 AC007686.3-201ENST00000619017 3487 ntBASIC14.09□□□□□ -0.15
CENPAP49450 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CENPAP49450 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CENPAP49450 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.08□□□□□ -0.15
CENPAP49450 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
CENPAP49450 REXO1L1P-201ENST00000379010 6598 ntBASIC14.08□□□□□ -0.15
CENPAP49450 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.08□□□□□ -0.15
CENPAP49450 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
CENPAP49450 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CENPAP49450 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.08□□□□□ -0.15
CENPAP49450 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 RBPMS2P1-201ENST00000437762 623 ntBASIC14.08□□□□□ -0.16
CENPAP49450 MTND6P24-201ENST00000440466 518 ntBASIC14.08□□□□□ -0.16
CENPAP49450 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.08□□□□□ -0.16
CENPAP49450 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.08□□□□□ -0.16
CENPAP49450 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.08□□□□□ -0.16
CENPAP49450 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.08□□□□□ -0.16
CENPAP49450 TNRC18P2-201ENST00000417666 2714 ntBASIC14.08□□□□□ -0.16
CENPAP49450 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.08□□□□□ -0.16
CENPAP49450 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CENPAP49450 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CENPAP49450 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CENPAP49450 AC112693.3-201ENST00000624819 1983 ntBASIC14.07□□□□□ -0.16
CENPAP49450 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms