Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
HOXC12P31275 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.74□□□□□ -0.21
HOXC12P31275 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.74□□□□□ -0.21
HOXC12P31275 ACTBP11-201ENST00000436287 1126 ntBASIC13.74□□□□□ -0.21
HOXC12P31275 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.74□□□□□ -0.21
HOXC12P31275 GALT-202ENST00000450095 1280 ntTSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 AL589987.1-201ENST00000453380 819 ntBASIC13.74□□□□□ -0.21
HOXC12P31275 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.74□□□□□ -0.21
HOXC12P31275 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 AC097359.3-201ENST00000603982 1210 ntBASIC13.74□□□□□ -0.21
HOXC12P31275 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 NID2-208ENST00000617139 3827 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 AL158212.4-201ENST00000624062 1286 ntBASIC13.74□□□□□ -0.21
HOXC12P31275 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
HOXC12P31275 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
HOXC12P31275 CLK3P2-201ENST00000427566 1453 ntBASIC13.74□□□□□ -0.21
HOXC12P31275 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
HOXC12P31275 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
HOXC12P31275 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 AL162727.3-201ENST00000635661 2787 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 AL136379.1-201ENST00000623471 2642 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HOXC12P31275 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC074338.1-201ENST00000416825 156 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC104989.1-201ENST00000519711 778 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXC12P31275 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXC12P31275 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC015936.2-201ENST00000593177 259 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 MIR6787-201ENST00000616675 61 ntBASIC13.73□□□□□ -0.21
HOXC12P31275 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HOXC12P31275 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.73□□□□□ -0.21
HOXC12P31275 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.73□□□□□ -0.21
HOXC12P31275 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HOXC12P31275 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
HOXC12P31275 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HOXC12P31275 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
HOXC12P31275 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC13.72□□□□□ -0.21
HOXC12P31275 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms