Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
PTPN6P29350 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 AC104457.1-201ENST00000401024 814 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.66□□□□□ -0.06
PTPN6P29350 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 INGX-202ENST00000489074 768 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.66□□□□□ -0.06
PTPN6P29350 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.66□□□□□ -0.06
PTPN6P29350 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 AJ011932.1-201ENST00000621707 465 ntBASIC14.66□□□□□ -0.06
PTPN6P29350 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.66□□□□□ -0.06
PTPN6P29350 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PTPN6P29350 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PTPN6P29350 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN6P29350 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 AL512638.1-201ENST00000457493 794 ntBASIC14.65□□□□□ -0.06
PTPN6P29350 AC004890.2-204ENST00000481968 304 ntBASIC14.65□□□□□ -0.06
PTPN6P29350 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 SLED1-202ENST00000512051 380 ntBASIC14.65□□□□□ -0.06
PTPN6P29350 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.65□□□□□ -0.06
PTPN6P29350 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN6P29350 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 AC007686.3-201ENST00000619017 3487 ntBASIC14.65□□□□□ -0.06
PTPN6P29350 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.65□□□□□ -0.06
PTPN6P29350 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
PTPN6P29350 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.65□□□□□ -0.06
PTPN6P29350 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PTPN6P29350 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PTPN6P29350 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.64□□□□□ -0.07
PTPN6P29350 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PTPN6P29350 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.64□□□□□ -0.07
PTPN6P29350 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms