Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
EPHA3P29320 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
EPHA3P29320 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.06■□□□□ 0
EPHA3P29320 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
EPHA3P29320 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.05■□□□□ 0
EPHA3P29320 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
EPHA3P29320 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
EPHA3P29320 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
EPHA3P29320 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
EPHA3P29320 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
EPHA3P29320 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
EPHA3P29320 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 MED15P5-201ENST00000423150 992 ntBASIC15.05■□□□□ -0
EPHA3P29320 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.05■□□□□ -0
EPHA3P29320 HIST3H2BA-201ENST00000436555 524 ntBASIC15.05■□□□□ -0
EPHA3P29320 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 TIMM8BP1-201ENST00000452384 211 ntBASIC15.05■□□□□ -0
EPHA3P29320 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 ZNF259P1-201ENST00000407656 1365 ntBASIC15.05■□□□□ -0
EPHA3P29320 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 AC113367.3-201ENST00000508316 1912 ntBASIC15.05■□□□□ -0
EPHA3P29320 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 AP001267.2-201ENST00000532619 2086 ntBASIC15.05■□□□□ -0
EPHA3P29320 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
EPHA3P29320 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
EPHA3P29320 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
EPHA3P29320 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.04■□□□□ -0
EPHA3P29320 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
EPHA3P29320 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.04■□□□□ -0
EPHA3P29320 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.04■□□□□ -0
EPHA3P29320 AL591424.1-201ENST00000442569 1213 ntBASIC15.04■□□□□ -0
EPHA3P29320 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.04■□□□□ -0
EPHA3P29320 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.04■□□□□ -0
EPHA3P29320 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.04■□□□□ -0
EPHA3P29320 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.04■□□□□ -0
EPHA3P29320 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
EPHA3P29320 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 AC084121.4-201ENST00000641598 221 ntBASIC15.04■□□□□ -0
EPHA3P29320 AF228730.8-201ENST00000642140 221 ntBASIC15.04■□□□□ -0
EPHA3P29320 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
EPHA3P29320 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms