Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 TKT-202ENST00000423516 2075 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB4AP20338 CYB561-217ENST00000582997 877 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB4AP20338 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC11.92□□□□□ -0.5
RAB4AP20338 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB4AP20338 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC11.92□□□□□ -0.5
RAB4AP20338 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
RAB4AP20338 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 PTPRVP-205ENST00000641549 5067 ntBASIC11.92□□□□□ -0.5
RAB4AP20338 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAB4AP20338 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 ACO2-201ENST00000216254 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
RAB4AP20338 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC11.92□□□□□ -0.5
RAB4AP20338 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
RAB4AP20338 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
RAB4AP20338 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 CCDC92-208ENST00000545135 4883 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
RAB4AP20338 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4AP20338 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4AP20338 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC11.91□□□□□ -0.5
RAB4AP20338 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC11.91□□□□□ -0.5
RAB4AP20338 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC11.91□□□□□ -0.5
RAB4AP20338 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.91□□□□□ -0.5
RAB4AP20338 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 AC083849.1-201ENST00000615227 514 ntBASIC11.91□□□□□ -0.5
RAB4AP20338 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 PDE5A-202ENST00000354960 7154 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB4AP20338 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
RAB4AP20338 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC11.91□□□□□ -0.5
RAB4AP20338 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 AC105206.1-202ENST00000314927 2368 ntBASIC11.91□□□□□ -0.5
RAB4AP20338 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
RAB4AP20338 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
RAB4AP20338 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 AC092053.3-201ENST00000641308 4975 ntBASIC11.9□□□□□ -0.5
RAB4AP20338 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
RAB4AP20338 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.9□□□□□ -0.5
RAB4AP20338 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RAB4AP20338 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
RAB4AP20338 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RAB4AP20338 SOD2-201ENST00000337404 991 ntTSL 2 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms