Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2B1P20020 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
ATP2B1P20020 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2B1P20020 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2B1P20020 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
ATP2B1P20020 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 MECR-202ENST00000373791 2416 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2B1P20020 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 OR2I1P-210ENST00000642037 4691 ntBASIC17.84■□□□□ 0.45
ATP2B1P20020 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2B1P20020 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2B1P20020 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC17.84■□□□□ 0.45
ATP2B1P20020 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2B1P20020 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2B1P20020 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP2B1P20020 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
ATP2B1P20020 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2B1P20020 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2B1P20020 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP2B1P20020 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP2B1P20020 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP2B1P20020 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 TNRC18P2-201ENST00000417666 2714 ntBASIC17.83■□□□□ 0.45
ATP2B1P20020 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2B1P20020 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC17.83■□□□□ 0.45
ATP2B1P20020 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 MRPS18AP1-201ENST00000414458 589 ntBASIC17.83■□□□□ 0.44
ATP2B1P20020 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 AC114501.2-201ENST00000439631 535 ntBASIC17.83■□□□□ 0.44
ATP2B1P20020 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2B1P20020 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2B1P20020 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2B1P20020 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 RNA5SP421-201ENST00000516864 134 ntBASIC17.83■□□□□ 0.44
ATP2B1P20020 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2B1P20020 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 HADH-212ENST00000638621 741 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2B1P20020 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2B1P20020 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2B1P20020 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
ATP2B1P20020 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2B1P20020 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP2B1P20020 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2B1P20020 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms