Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD53P19397 AC098614.1-201ENST00000368528 745 ntBASIC14.09□□□□□ -0.15
CD53P19397 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.09□□□□□ -0.15
CD53P19397 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 PRYP6-201ENST00000514804 343 ntBASIC14.09□□□□□ -0.15
CD53P19397 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 AL844908.2-201ENST00000609461 460 ntBASIC14.09□□□□□ -0.15
CD53P19397 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.09□□□□□ -0.15
CD53P19397 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD53P19397 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CD53P19397 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CD53P19397 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CD53P19397 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD53P19397 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CD53P19397 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.08□□□□□ -0.15
CD53P19397 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CD53P19397 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.08□□□□□ -0.16
CD53P19397 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.08□□□□□ -0.16
CD53P19397 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC14.08□□□□□ -0.16
CD53P19397 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.08□□□□□ -0.16
CD53P19397 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.08□□□□□ -0.16
CD53P19397 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.08□□□□□ -0.16
CD53P19397 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 AL589739.1-201ENST00000607720 493 ntBASIC14.08□□□□□ -0.16
CD53P19397 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CD53P19397 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 AP002414.2-201ENST00000591780 3365 ntBASIC14.08□□□□□ -0.16
CD53P19397 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.08□□□□□ -0.16
CD53P19397 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.08□□□□□ -0.16
CD53P19397 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CD53P19397 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
CD53P19397 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms