Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PTPN1P18031 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 RNU1-114P-201ENST00000365297 166 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN1P18031 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN1P18031 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 GHSR-202ENST00000427970 912 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 KRT43P-201ENST00000434019 910 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 ACA64.2-201ENST00000459014 129 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 KRT18P25-201ENST00000508931 1278 ntBASIC16.29■□□□□ 0.2
PTPN1P18031 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN1P18031 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN1P18031 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.29■□□□□ 0.2
PTPN1P18031 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.29■□□□□ 0.2
PTPN1P18031 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
PTPN1P18031 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.29■□□□□ 0.2
PTPN1P18031 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PTPN1P18031 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 KRT8P44-201ENST00000441609 1350 ntBASIC16.28■□□□□ 0.2
PTPN1P18031 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN1P18031 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 AC092933.1-201ENST00000393644 945 ntBASIC16.28■□□□□ 0.2
PTPN1P18031 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN1P18031 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 KLF2P2-201ENST00000416807 1039 ntBASIC16.28■□□□□ 0.2
PTPN1P18031 ARSEP1-201ENST00000420443 635 ntBASIC16.28■□□□□ 0.2
PTPN1P18031 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 AC106760.1-201ENST00000508690 800 ntBASIC16.28■□□□□ 0.2
PTPN1P18031 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN1P18031 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN1P18031 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN1P18031 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC16.28■□□□□ 0.2
PTPN1P18031 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.28■□□□□ 0.2
PTPN1P18031 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
PTPN1P18031 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PTPN1P18031 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.28■□□□□ 0.2
PTPN1P18031 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
PTPN1P18031 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PTPN1P18031 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms