Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 AL033527.5-202ENST00000641632 1098 ntBASIC16.77■□□□□ 0.28
CCDC172P0C7W6 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC172P0C7W6 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 AC091951.1-201ENST00000512854 2465 ntBASIC16.77■□□□□ 0.27
CCDC172P0C7W6 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC172P0C7W6 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 CNN2P11-201ENST00000429351 262 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AP000347.1-202ENST00000435868 847 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SNHG9-202ENST00000564014 471 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ZBED1P1-201ENST00000502364 1930 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AC005089.1-201ENST00000619486 2241 ntBASIC16.76■□□□□ 0.27
CCDC172P0C7W6 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC172P0C7W6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 AL133267.1-201ENST00000398220 340 ntBASIC16.75■□□□□ 0.27
CCDC172P0C7W6 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 AP006288.1-201ENST00000446065 395 ntBASIC16.75■□□□□ 0.27
CCDC172P0C7W6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.75■□□□□ 0.27
CCDC172P0C7W6 AC069262.1-201ENST00000539058 672 ntBASIC16.75■□□□□ 0.27
CCDC172P0C7W6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms