Protein–RNA interactions for Protein: P08684

CYP3A4, Cytochrome P450 3A4, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP3A4P08684 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.21■□□□□ 0.35
CYP3A4P08684 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
CYP3A4P08684 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC17.21■□□□□ 0.35
CYP3A4P08684 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
CYP3A4P08684 AC245100.3-201ENST00000441281 285 ntBASIC17.21■□□□□ 0.35
CYP3A4P08684 KRT223P-202ENST00000449164 1292 ntBASIC17.21■□□□□ 0.35
CYP3A4P08684 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 AC026434.2-201ENST00000506094 1078 ntBASIC17.21■□□□□ 0.35
CYP3A4P08684 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CYP3A4P08684 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.21■□□□□ 0.35
CYP3A4P08684 AC133552.6-201ENST00000613406 534 ntBASIC17.21■□□□□ 0.35
CYP3A4P08684 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CYP3A4P08684 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CYP3A4P08684 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
CYP3A4P08684 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
CYP3A4P08684 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
CYP3A4P08684 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CYP3A4P08684 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CYP3A4P08684 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC17.2■□□□□ 0.34
CYP3A4P08684 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.2■□□□□ 0.34
CYP3A4P08684 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CYP3A4P08684 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.2■□□□□ 0.34
CYP3A4P08684 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 AC079316.1-201ENST00000548397 411 ntBASIC17.2■□□□□ 0.34
CYP3A4P08684 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 AL008721.1-201ENST00000609964 604 ntBASIC17.2■□□□□ 0.34
CYP3A4P08684 AC006453.4-201ENST00000636949 1252 ntBASIC17.2■□□□□ 0.34
CYP3A4P08684 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CYP3A4P08684 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.2■□□□□ 0.34
CYP3A4P08684 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.19■□□□□ 0.34
CYP3A4P08684 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CYP3A4P08684 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
CYP3A4P08684 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.19■□□□□ 0.34
CYP3A4P08684 AC099336.1-201ENST00000417053 1171 ntBASIC17.19■□□□□ 0.34
CYP3A4P08684 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 CSF2RBP1-201ENST00000447905 391 ntBASIC17.19■□□□□ 0.34
CYP3A4P08684 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC17.19■□□□□ 0.34
CYP3A4P08684 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC17.19■□□□□ 0.34
CYP3A4P08684 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.19■□□□□ 0.34
CYP3A4P08684 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.19■□□□□ 0.34
CYP3A4P08684 AC004466.1-201ENST00000599515 1080 ntBASIC17.19■□□□□ 0.34
CYP3A4P08684 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CYP3A4P08684 CROCCP1-201ENST00000426910 5675 ntBASIC17.19■□□□□ 0.34
CYP3A4P08684 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 ZBED1P1-201ENST00000502364 1930 ntBASIC17.19■□□□□ 0.34
CYP3A4P08684 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CYP3A4P08684 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CYP3A4P08684 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
CYP3A4P08684 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CYP3A4P08684 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 AC104640.1-201ENST00000562617 2109 ntBASIC17.18■□□□□ 0.34
CYP3A4P08684 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
CYP3A4P08684 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.18■□□□□ 0.34
CYP3A4P08684 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CYP3A4P08684 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms