Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 AL359881.3-201ENST00000602640 1721 ntBASIC12.86□□□□□ -0.35
CTSDP07339 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 HLA-H-201ENST00000383620 1096 ntBASIC12.86□□□□□ -0.35
CTSDP07339 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 RNA5SP419-201ENST00000515908 135 ntBASIC12.86□□□□□ -0.35
CTSDP07339 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 NAA38-207ENST00000576861 556 ntTSL 3 BASIC12.86□□□□□ -0.35
CTSDP07339 AP002472.1-201ENST00000577490 586 ntBASIC12.86□□□□□ -0.35
CTSDP07339 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.86□□□□□ -0.35
CTSDP07339 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.86□□□□□ -0.35
CTSDP07339 AC099522.2-201ENST00000607001 744 ntBASIC12.86□□□□□ -0.35
CTSDP07339 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 AC015802.1-201ENST00000588104 1449 ntBASIC12.86□□□□□ -0.35
CTSDP07339 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CTSDP07339 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC12.86□□□□□ -0.35
CTSDP07339 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.86□□□□□ -0.35
CTSDP07339 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 AC012508.2-201ENST00000567613 1472 ntBASIC12.85□□□□□ -0.35
CTSDP07339 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
CTSDP07339 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.85□□□□□ -0.35
CTSDP07339 FDX1P1-201ENST00000449115 551 ntBASIC12.85□□□□□ -0.35
CTSDP07339 AC074386.1-202ENST00000463561 864 ntBASIC12.85□□□□□ -0.35
CTSDP07339 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.85□□□□□ -0.35
CTSDP07339 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.85□□□□□ -0.35
CTSDP07339 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
CTSDP07339 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC12.85□□□□□ -0.35
CTSDP07339 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CTSDP07339 AC152010.1-201ENST00000415779 2006 ntBASIC12.84□□□□□ -0.35
CTSDP07339 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
CTSDP07339 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CTSDP07339 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CTSDP07339 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms