Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRAP04437 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC11.79□□□□□ -0.52
TCRAP04437 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.79□□□□□ -0.52
TCRAP04437 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
TCRAP04437 SPIB-207ENST00000597855 564 ntTSL 4 BASIC11.79□□□□□ -0.52
TCRAP04437 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 Z83851.2-201ENST00000609564 659 ntBASIC11.79□□□□□ -0.52
TCRAP04437 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
TCRAP04437 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 AC018529.2-202ENST00000611482 3087 ntBASIC11.79□□□□□ -0.52
TCRAP04437 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
TCRAP04437 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC11.79□□□□□ -0.52
TCRAP04437 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
TCRAP04437 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 C1R-201ENST00000535233 2211 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 SLC9A7P1-202ENST00000556476 2239 ntBASIC11.78□□□□□ -0.52
TCRAP04437 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 PDPK2P-202ENST00000562415 1191 ntBASIC11.78□□□□□ -0.52
TCRAP04437 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 CALM3-211ENST00000598871 561 ntTSL 4 BASIC11.78□□□□□ -0.52
TCRAP04437 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 AC064836.3-201ENST00000607928 673 ntBASIC11.78□□□□□ -0.52
TCRAP04437 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.78□□□□□ -0.52
TCRAP04437 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
TCRAP04437 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
TCRAP04437 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
TCRAP04437 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms