Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.18■□□□□ 0.02
CPNE6O95741 AC106881.1-201ENST00000605849 3329 ntBASIC15.18■□□□□ 0.02
CPNE6O95741 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CPNE6O95741 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
CPNE6O95741 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPNE6O95741 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 LINC01101-201ENST00000622953 1884 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 AC020658.6-201ENST00000623564 1870 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CPNE6O95741 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC15.17■□□□□ 0.02
CPNE6O95741 CROCCP4-201ENST00000457096 498 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 MIR5189-201ENST00000577370 114 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 AL022328.1-201ENST00000610050 478 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 MIR6775-201ENST00000617557 69 ntBASIC15.17■□□□□ 0.02
CPNE6O95741 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
CPNE6O95741 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.17■□□□□ 0.02
CPNE6O95741 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.17■□□□□ 0.02
CPNE6O95741 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CPNE6O95741 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.16■□□□□ 0.02
CPNE6O95741 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
CPNE6O95741 AC119751.2-201ENST00000504529 210 ntBASIC15.16■□□□□ 0.02
CPNE6O95741 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
CPNE6O95741 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC15.16■□□□□ 0.02
CPNE6O95741 MIR4259-201ENST00000584466 101 ntBASIC15.16■□□□□ 0.02
CPNE6O95741 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 AL049840.4-201ENST00000602422 811 ntBASIC15.16■□□□□ 0.02
CPNE6O95741 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
CPNE6O95741 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
CPNE6O95741 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CPNE6O95741 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms