Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 AL139385.1-201ENST00000611744 3272 ntBASIC14.11□□□□□ -0.15
CLPXO76031 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CLPXO76031 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CLPXO76031 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC14.11□□□□□ -0.15
CLPXO76031 ACE3P-201ENST00000423435 1973 ntBASIC14.11□□□□□ -0.15
CLPXO76031 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.1□□□□□ -0.15
CLPXO76031 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 AL591122.2-201ENST00000624125 1853 ntBASIC14.1□□□□□ -0.15
CLPXO76031 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC14.1□□□□□ -0.15
CLPXO76031 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CLPXO76031 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 FABP5-202ENST00000396359 986 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 MIR1233-2-201ENST00000408138 82 ntBASIC14.1□□□□□ -0.15
CLPXO76031 MIR1233-1-201ENST00000408722 82 ntBASIC14.1□□□□□ -0.15
CLPXO76031 ELK2BP-201ENST00000415014 1224 ntBASIC14.1□□□□□ -0.15
CLPXO76031 HNRNPDP1-201ENST00000439535 754 ntBASIC14.1□□□□□ -0.15
CLPXO76031 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.1□□□□□ -0.15
CLPXO76031 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.1□□□□□ -0.15
CLPXO76031 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 AC004706.3-202ENST00000621574 984 ntBASIC14.1□□□□□ -0.15
CLPXO76031 AC116407.3-201ENST00000623905 1129 ntBASIC14.1□□□□□ -0.15
CLPXO76031 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.1□□□□□ -0.15
CLPXO76031 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.1□□□□□ -0.15
CLPXO76031 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CLPXO76031 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 WASH3P-207ENST00000560956 1394 ntBASIC14.09□□□□□ -0.15
CLPXO76031 FO538757.1-201ENST00000623083 1397 ntBASIC14.09□□□□□ -0.15
CLPXO76031 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CLPXO76031 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CLPXO76031 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.09□□□□□ -0.15
CLPXO76031 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.09□□□□□ -0.15
CLPXO76031 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLPXO76031 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.09□□□□□ -0.15
CLPXO76031 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.09□□□□□ -0.15
CLPXO76031 AL645939.2-201ENST00000427340 991 ntBASIC14.09□□□□□ -0.15
CLPXO76031 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms