Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC12.72□□□□□ -0.37
CLN5O75503 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLN5O75503 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
CLN5O75503 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.72□□□□□ -0.37
CLN5O75503 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CLN5O75503 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.72□□□□□ -0.37
CLN5O75503 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CLN5O75503 MVP-202ENST00000395353 2925 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CLN5O75503 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CLN5O75503 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.71□□□□□ -0.37
CLN5O75503 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.71□□□□□ -0.37
CLN5O75503 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 AOC4P-203ENST00000566825 2289 ntBASIC12.71□□□□□ -0.37
CLN5O75503 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 AC245100.5-201ENST00000452108 331 ntBASIC12.71□□□□□ -0.37
CLN5O75503 HS6ST1P1-201ENST00000481504 1234 ntBASIC12.71□□□□□ -0.37
CLN5O75503 RNA5SP419-201ENST00000515908 135 ntBASIC12.71□□□□□ -0.37
CLN5O75503 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.71□□□□□ -0.37
CLN5O75503 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 CD7-202ENST00000578509 925 ntTSL 3 BASIC12.71□□□□□ -0.37
CLN5O75503 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC12.71□□□□□ -0.37
CLN5O75503 Z83851.2-201ENST00000609564 659 ntBASIC12.71□□□□□ -0.37
CLN5O75503 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.71□□□□□ -0.37
CLN5O75503 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.71□□□□□ -0.37
CLN5O75503 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CLN5O75503 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLN5O75503 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.71□□□□□ -0.38
CLN5O75503 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.71□□□□□ -0.38
CLN5O75503 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.71□□□□□ -0.38
CLN5O75503 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.71□□□□□ -0.38
CLN5O75503 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CLN5O75503 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CLN5O75503 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLN5O75503 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN5O75503 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.7□□□□□ -0.38
CLN5O75503 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 AC008677.1-201ENST00000519230 1561 ntBASIC12.7□□□□□ -0.38
CLN5O75503 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.7□□□□□ -0.38
CLN5O75503 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.7□□□□□ -0.38
CLN5O75503 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 AC140658.5-201ENST00000438532 169 ntBASIC12.7□□□□□ -0.38
CLN5O75503 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
CLN5O75503 PENK-208ENST00000523051 772 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 KRT126P-201ENST00000549467 1181 ntBASIC12.7□□□□□ -0.38
CLN5O75503 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC12.7□□□□□ -0.38
CLN5O75503 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.7□□□□□ -0.38
CLN5O75503 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CLN5O75503 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms