Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.42■□□□□ 0.06
NDUFS3O75489 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 AGAP7P-201ENST00000582299 2062 ntBASIC15.42■□□□□ 0.06
NDUFS3O75489 AGAP14-201ENST00000624701 2060 ntBASIC15.42■□□□□ 0.06
NDUFS3O75489 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.42■□□□□ 0.06
NDUFS3O75489 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NDUFS3O75489 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NDUFS3O75489 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 WASH3P-207ENST00000560956 1394 ntBASIC15.41■□□□□ 0.06
NDUFS3O75489 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NDUFS3O75489 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFS3O75489 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
NDUFS3O75489 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AC005498.2-205ENST00000593218 784 ntBASIC15.41■□□□□ 0.06
NDUFS3O75489 SRD5A3P1-201ENST00000603021 949 ntBASIC15.41■□□□□ 0.06
NDUFS3O75489 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 AC004840.1-201ENST00000636359 365 ntBASIC15.41■□□□□ 0.06
NDUFS3O75489 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.41■□□□□ 0.06
NDUFS3O75489 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.41■□□□□ 0.06
NDUFS3O75489 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NDUFS3O75489 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NDUFS3O75489 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFS3O75489 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFS3O75489 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFS3O75489 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.4■□□□□ 0.06
NDUFS3O75489 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.4■□□□□ 0.06
NDUFS3O75489 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NDUFS3O75489 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC15.4■□□□□ 0.06
NDUFS3O75489 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.4■□□□□ 0.06
NDUFS3O75489 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.4■□□□□ 0.06
NDUFS3O75489 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.4■□□□□ 0.06
NDUFS3O75489 RNA5SP421-201ENST00000516864 134 ntBASIC15.4■□□□□ 0.06
NDUFS3O75489 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms