Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPHN1O60890 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
OPHN1O60890 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
OPHN1O60890 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
OPHN1O60890 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
OPHN1O60890 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
OPHN1O60890 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OPHN1O60890 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 AC023157.3-201ENST00000619086 2088 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.18■□□□□ 0.18
OPHN1O60890 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 TNRC18P2-201ENST00000417666 2714 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
OPHN1O60890 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.18■□□□□ 0.18
OPHN1O60890 TCAF2P1-201ENST00000291129 2421 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 AL109954.1-202ENST00000564051 2148 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OPHN1O60890 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.18■□□□□ 0.18
OPHN1O60890 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.18■□□□□ 0.18
OPHN1O60890 FO393414.2-201ENST00000405153 598 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 AC093004.1-201ENST00000508850 424 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.18■□□□□ 0.18
OPHN1O60890 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 RAB43P1-201ENST00000561790 589 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.18■□□□□ 0.18
OPHN1O60890 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.18■□□□□ 0.18
OPHN1O60890 AC132938.2-201ENST00000579188 680 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
OPHN1O60890 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.18■□□□□ 0.18
OPHN1O60890 AL591163.1-201ENST00000641757 987 ntBASIC16.18■□□□□ 0.18
OPHN1O60890 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
OPHN1O60890 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
OPHN1O60890 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
OPHN1O60890 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.18■□□□□ 0.18
OPHN1O60890 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.17■□□□□ 0.18
OPHN1O60890 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC16.17■□□□□ 0.18
OPHN1O60890 AL133215.2-201ENST00000609242 977 ntBASIC16.17■□□□□ 0.18
OPHN1O60890 Six3os1_5.1-201ENST00000611000 271 ntBASIC16.17■□□□□ 0.18
OPHN1O60890 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
OPHN1O60890 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 AC009090.5-201ENST00000624886 2285 ntBASIC16.17■□□□□ 0.18
OPHN1O60890 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 AC006486.2-201ENST00000624246 2199 ntBASIC16.17■□□□□ 0.18
OPHN1O60890 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
OPHN1O60890 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
OPHN1O60890 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.17■□□□□ 0.18
OPHN1O60890 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms