Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.33■□□□□ 0.04
PCDHGA12O60330 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.33■□□□□ 0.04
PCDHGA12O60330 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PCDHGA12O60330 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AC013268.4-201ENST00000637413 2228 ntBASIC15.32■□□□□ 0.04
PCDHGA12O60330 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 KRT8P13-201ENST00000463294 1010 ntBASIC15.32■□□□□ 0.04
PCDHGA12O60330 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 GNRHR2-203ENST00000581100 1187 ntBASIC15.32■□□□□ 0.04
PCDHGA12O60330 AC009542.2-202ENST00000619004 1067 ntBASIC15.32■□□□□ 0.04
PCDHGA12O60330 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AL121723.1-201ENST00000445194 1519 ntBASIC15.32■□□□□ 0.04
PCDHGA12O60330 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PCDHGA12O60330 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.32■□□□□ 0.04
PCDHGA12O60330 AC022532.1-201ENST00000624563 1728 ntBASIC15.31■□□□□ 0.04
PCDHGA12O60330 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AP005117.1-202ENST00000581724 1908 ntBASIC15.31■□□□□ 0.04
PCDHGA12O60330 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC006449.6-201ENST00000612330 2296 ntBASIC15.31■□□□□ 0.04
PCDHGA12O60330 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC091271.1-201ENST00000611877 1162 ntBASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PCDHGA12O60330 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PCDHGA12O60330 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms