Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
CXCL13O43927 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
CXCL13O43927 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.8□□□□□ -0.2
CXCL13O43927 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
CXCL13O43927 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
CXCL13O43927 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL13O43927 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL13O43927 PTP4A1P2-201ENST00000546033 454 ntBASIC13.79□□□□□ -0.2
CXCL13O43927 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 SAMD11P1-201ENST00000571429 661 ntBASIC13.79□□□□□ -0.2
CXCL13O43927 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL13O43927 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC13.79□□□□□ -0.2
CXCL13O43927 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.79□□□□□ -0.2
CXCL13O43927 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 AC112693.3-201ENST00000624819 1983 ntBASIC13.79□□□□□ -0.2
CXCL13O43927 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 CICP6-201ENST00000457191 2729 ntBASIC13.79□□□□□ -0.2
CXCL13O43927 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
CXCL13O43927 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CXCL13O43927 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CXCL13O43927 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CXCL13O43927 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.78□□□□□ -0.2
CXCL13O43927 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 AC093433.1-201ENST00000458048 571 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CXCL13O43927 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.78□□□□□ -0.2
CXCL13O43927 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
CXCL13O43927 AC015936.2-201ENST00000593177 259 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 AC008735.3-201ENST00000596646 500 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 AL645728.2-202ENST00000641679 227 ntBASIC13.78□□□□□ -0.2
CXCL13O43927 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CXCL13O43927 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms