Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 AC117500.6-201ENST00000624871 588 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 AC099521.3-201ENST00000624251 2938 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
SNAI2O43623 AC027601.5-201ENST00000624065 2482 ntBASIC11.64□□□□□ -0.55
SNAI2O43623 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
SNAI2O43623 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.64□□□□□ -0.55
SNAI2O43623 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 AL356585.2-201ENST00000625078 2396 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 FGD5P1-202ENST00000614866 2498 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 AL691432.1-201ENST00000596308 1422 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
SNAI2O43623 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC11.63□□□□□ -0.55
SNAI2O43623 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 AC108751.1-201ENST00000490852 363 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 SKP2-204ENST00000508514 821 ntTSL 3 BASIC11.63□□□□□ -0.55
SNAI2O43623 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC11.63□□□□□ -0.55
SNAI2O43623 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC11.63□□□□□ -0.55
SNAI2O43623 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.63□□□□□ -0.55
SNAI2O43623 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 REXO1L1P-202ENST00000608646 1974 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.63□□□□□ -0.55
SNAI2O43623 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.63□□□□□ -0.55
SNAI2O43623 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC11.63□□□□□ -0.55
SNAI2O43623 DMBT1P1-203ENST00000636837 4628 ntBASIC11.63□□□□□ -0.55
SNAI2O43623 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.62□□□□□ -0.55
SNAI2O43623 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SNAI2O43623 APP-205ENST00000358918 2366 ntTSL 5 BASIC11.62□□□□□ -0.55
SNAI2O43623 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.62□□□□□ -0.55
SNAI2O43623 INTS4P1-203ENST00000641008 3683 ntBASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms