Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 IGHV3-42-201ENST00000520410 361 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1AO00322 ZNF890P-202ENST00000530367 1156 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.64□□□□□ -0.07
UPK1AO00322 AC044860.1-202ENST00000559481 777 ntBASIC14.64□□□□□ -0.07
UPK1AO00322 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.64□□□□□ -0.07
UPK1AO00322 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
UPK1AO00322 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.64□□□□□ -0.07
UPK1AO00322 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 AC015922.1-201ENST00000421102 1152 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 AC055876.3-201ENST00000431496 288 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.63□□□□□ -0.07
UPK1AO00322 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.63□□□□□ -0.07
UPK1AO00322 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 AC138649.4-201ENST00000612222 287 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 AC093512.1-201ENST00000617969 520 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
UPK1AO00322 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 AC084364.1-201ENST00000551967 1556 ntBASIC14.63□□□□□ -0.07
UPK1AO00322 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
UPK1AO00322 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
UPK1AO00322 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1AO00322 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.62□□□□□ -0.07
UPK1AO00322 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.62□□□□□ -0.07
UPK1AO00322 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
UPK1AO00322 AC009477.1-201ENST00000452936 217 ntBASIC14.62□□□□□ -0.07
UPK1AO00322 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
UPK1AO00322 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.62□□□□□ -0.07
UPK1AO00322 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.62□□□□□ -0.07
UPK1AO00322 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms