Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AC006033.1-201ENST00000440505 426 ntBASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AP001258.2-201ENST00000529891 490 ntBASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SAMD11P1-201ENST00000571429 661 ntBASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 ENPP7P14-201ENST00000621765 1040 ntBASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 KRT8P14-201ENST00000414254 1442 ntBASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TBC1D3BA6NDS4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 RPS3-201ENST00000278572 907 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 MTX1P1-201ENST00000440904 838 ntBASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 KRT8P13-201ENST00000463294 1010 ntBASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 C2orf69P2-201ENST00000562032 1123 ntBASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TBC1D3BA6NDS4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 AC015818.8-201ENST00000587907 1519 ntBASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TBC1D3BA6NDS4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TBC1D3BA6NDS4 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms