Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AF186996.4-201ENST00000467186 377 ntBASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 AC023141.13-201ENST00000604991 943 ntBASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 AP001267.2-201ENST00000532619 2086 ntBASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MEIS3P1A6NDR6 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AC131212.3-201ENST00000624087 4219 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 RPS2P28-201ENST00000314255 741 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 HCG4B-203ENST00000450128 991 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AC096734.2-201ENST00000562054 433 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ARL16-209ENST00000573715 763 ntTSL 3 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ARL16-211ENST00000576135 694 ntTSL 3 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SPTSSB-204ENST00000617024 1292 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 KRT8P37-201ENST00000451609 1420 ntBASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.29□□□□□ -0.28
MEIS3P1A6NDR6 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 AC136759.1-202ENST00000530858 2194 ntBASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
MEIS3P1A6NDR6 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms