Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CCDC66A2RUB6 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC66A2RUB6 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.83■□□□□ 0.29
CCDC66A2RUB6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC66A2RUB6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CCDC66A2RUB6 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
CCDC66A2RUB6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 KRT18P2-201ENST00000447938 1258 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AC243562.2-201ENST00000561247 970 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AP002472.1-201ENST00000577490 586 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AC090616.6-203ENST00000579186 1945 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 AC148477.4-201ENST00000613430 1793 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 Z82170.1-201ENST00000625081 3192 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 LINC01230-201ENST00000625222 3017 ntBASIC16.83■□□□□ 0.28
CCDC66A2RUB6 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.83■□□□□ 0.28
CCDC66A2RUB6 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 IL9RP2-201ENST00000423948 1312 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC112191.1-201ENST00000523689 701 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC105233.2-201ENST00000523697 349 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AF228730.5-201ENST00000530288 346 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 AC061975.2-201ENST00000581722 295 ntBASIC16.82■□□□□ 0.28
CCDC66A2RUB6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CCDC66A2RUB6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms