Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 GRN-214ENST00000589265 1632 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TRBV6-7A0A0A0MS04 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 ACE3P-201ENST00000423435 1973 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 ELL2P1-201ENST00000413990 1906 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 MIR940-201ENST00000401276 94 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC005237.2-201ENST00000434368 219 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 KRT18P58-201ENST00000527480 1120 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC022145.2-201ENST00000598203 171 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CICP11-201ENST00000434745 2827 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 AC113367.3-201ENST00000508316 1912 ntBASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TRBV6-7A0A0A0MS04 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CICP17-201ENST00000418553 2377 ntBASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TRBV6-7A0A0A0MS04 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms