Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 VMA21-202ENST00000370361 693 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 MIR943-201ENST00000401286 94 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 TREML5P-201ENST00000421694 576 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AL645939.2-201ENST00000427340 991 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 AC127383.1-201ENST00000444697 1800 ntBASIC11.7□□□□□ -0.54
HLA-DRB4X5D2U9 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AL359183.1-201ENST00000623796 2132 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC087499.5-201ENST00000452760 1342 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 Z97205.2-201ENST00000564697 1639 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 HLA-DRB6-201ENST00000411500 1235 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 TARDBPP1-201ENST00000442013 1203 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 IGHV3-42-201ENST00000520410 361 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AL512361.1-201ENST00000554200 418 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC010336.2-201ENST00000564226 506 ntBASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC11.69□□□□□ -0.54
HLA-DRB4X5D2U9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms