Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
FNDC3AQ9Y2H6 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 AL607033.1-201ENST00000623900 1599 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 KRT223P-202ENST00000449164 1292 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 HNRNPUP1-201ENST00000554987 333 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 MIR4313-201ENST00000580760 101 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 MIR6775-201ENST00000617557 69 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 OR2I1P-209ENST00000641730 5365 ntBASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
FNDC3AQ9Y2H6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 AC009090.5-201ENST00000624886 2285 ntBASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.83■□□□□ 0.13
FNDC3AQ9Y2H6 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 FO393414.2-201ENST00000405153 598 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 EEF1DP4-201ENST00000446006 880 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 CROCCP4-201ENST00000457096 498 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 AP005482.1-201ENST00000563722 1273 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 AC074044.1-201ENST00000609673 707 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 AC133552.6-201ENST00000613406 534 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 MIR8072-201ENST00000614241 80 ntBASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
FNDC3AQ9Y2H6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms