Protein–RNA interactions for Protein: Q9Y256

RCE1, CAAX prenyl protease 2, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCE1Q9Y256 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
RCE1Q9Y256 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 CMC2-214ENST00000565925 640 ntTSL 5 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 AL390955.2-201ENST00000603032 514 ntBASIC14.02□□□□□ -0.17
RCE1Q9Y256 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 CICP23-201ENST00000605013 2741 ntBASIC14.02□□□□□ -0.17
RCE1Q9Y256 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.02□□□□□ -0.17
RCE1Q9Y256 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
RCE1Q9Y256 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 LINC01101-201ENST00000622953 1884 ntBASIC14.01□□□□□ -0.17
RCE1Q9Y256 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AL512638.1-201ENST00000457493 794 ntBASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC004890.2-204ENST00000481968 304 ntBASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 RNA5SP421-201ENST00000516864 134 ntBASIC14.01□□□□□ -0.17
RCE1Q9Y256 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.01□□□□□ -0.17
RCE1Q9Y256 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
RCE1Q9Y256 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
RCE1Q9Y256 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14□□□□□ -0.17
RCE1Q9Y256 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCE1Q9Y256 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
RCE1Q9Y256 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14□□□□□ -0.17
RCE1Q9Y256 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14□□□□□ -0.17
RCE1Q9Y256 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14□□□□□ -0.17
RCE1Q9Y256 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14□□□□□ -0.17
RCE1Q9Y256 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RCE1Q9Y256 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms