Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 MIR940-201ENST00000401276 94 ntBASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 ALG1L5P-201ENST00000482043 771 ntBASIC13.84□□□□□ -0.19
COPS3Q9UNS2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AC040169.1-201ENST00000565382 521 ntBASIC13.84□□□□□ -0.19
COPS3Q9UNS2 AC105021.1-202ENST00000570572 669 ntBASIC13.84□□□□□ -0.19
COPS3Q9UNS2 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
COPS3Q9UNS2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
COPS3Q9UNS2 WASH3P-207ENST00000560956 1394 ntBASIC13.83□□□□□ -0.19
COPS3Q9UNS2 FO538757.1-201ENST00000623083 1397 ntBASIC13.83□□□□□ -0.19
COPS3Q9UNS2 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
COPS3Q9UNS2 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.83□□□□□ -0.19
COPS3Q9UNS2 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
COPS3Q9UNS2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
COPS3Q9UNS2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 RPL5P21-201ENST00000404620 815 ntBASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 C20orf181-201ENST00000623918 480 ntBASIC13.83□□□□□ -0.2
COPS3Q9UNS2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.83□□□□□ -0.2
COPS3Q9UNS2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
COPS3Q9UNS2 AC140479.7-201ENST00000636301 2332 ntBASIC13.82□□□□□ -0.2
COPS3Q9UNS2 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 ACTG1P14-201ENST00000446382 1122 ntBASIC13.82□□□□□ -0.2
COPS3Q9UNS2 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 PGAM5P1-201ENST00000518923 814 ntBASIC13.82□□□□□ -0.2
COPS3Q9UNS2 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.82□□□□□ -0.2
COPS3Q9UNS2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms