Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ABBA01031663.1-201ENST00000635630 790 ntBASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SYNPO2Q9UMS6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AL138725.1-201ENST00000407347 1314 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AL354877.1-201ENST00000424412 413 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 HIST2H2BB-201ENST00000449108 381 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AC091804.1-201ENST00000486888 567 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AP001258.2-201ENST00000529891 490 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 AP000845.1-201ENST00000581677 2131 ntBASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SYNPO2Q9UMS6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 KRT8P4-201ENST00000509735 1454 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC104306.2-201ENST00000451877 341 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 ZNF767P-206ENST00000513792 565 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC243960.2-201ENST00000600996 747 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC008825.2-201ENST00000603374 718 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC244093.1-201ENST00000610837 814 ntBASIC17.53■□□□□ 0.4
SYNPO2Q9UMS6 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms