Protein–RNA interactions for Protein: Q9UL41

PNMA3, Paraneoplastic antigen Ma3, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA3Q9UL41 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CYP46A4P-201ENST00000414953 267 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 HINT2P1-201ENST00000419438 481 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CHMP4BP1-201ENST00000556017 588 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AC073413.1-201ENST00000603927 732 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AP001505.2-201ENST00000616815 443 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 AL645728.2-202ENST00000641679 227 ntBASIC17.67■□□□□ 0.42
PNMA3Q9UL41 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PNMA3Q9UL41 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AL596087.1-201ENST00000400979 1969 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 POM121L8P-201ENST00000417732 1281 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 EIF3FP3-201ENST00000434851 1086 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 POM121L9P-203ENST00000441984 1285 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 RN7SL720P-201ENST00000488178 304 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC022188.1-201ENST00000620960 1664 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC069224.1-201ENST00000566372 1715 ntBASIC17.66■□□□□ 0.42
PNMA3Q9UL41 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.66■□□□□ 0.42
PNMA3Q9UL41 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 KRT8P4-201ENST00000509735 1454 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 GGCT-203ENST00000409144 836 ntTSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AL354877.1-201ENST00000424412 413 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AL391280.1-201ENST00000506969 1062 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AC005740.2-201ENST00000511085 419 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 SAMD11P1-201ENST00000571429 661 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AC091544.8-201ENST00000619490 361 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AL023803.2-201ENST00000620080 638 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 AP001002.3-201ENST00000623482 206 ntBASIC17.65■□□□□ 0.42
PNMA3Q9UL41 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PNMA3Q9UL41 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms