Protein–RNA interactions for Protein: Q9UJD0

RIMS3, Regulating synaptic membrane exocytosis protein 3, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMS3Q9UJD0 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 TFAMP1-201ENST00000412727 736 ntBASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AL590627.1-203ENST00000421194 1026 ntBASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AL671277.1-201ENST00000429656 993 ntBASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AL591424.1-201ENST00000442569 1213 ntBASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 AC008267.7-201ENST00000624570 1194 ntBASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
RIMS3Q9UJD0 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC004987.2-201ENST00000395959 1148 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 KRT18P3-201ENST00000451602 1288 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AL135744.1-201ENST00000565098 629 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AL450472.2-201ENST00000603663 1156 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC027601.4-201ENST00000611259 610 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 AC018442.1-201ENST00000421439 2061 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 COL6A4P2-202ENST00000504443 2753 ntBASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
RIMS3Q9UJD0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIMS3Q9UJD0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIMS3Q9UJD0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
RIMS3Q9UJD0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms