Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 Z83851.2-201ENST00000609564 659 ntBASIC14.16□□□□□ -0.14
CLN6Q9NWW5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 PTENP1-202ENST00000532280 3996 ntBASIC14.16□□□□□ -0.14
CLN6Q9NWW5 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.16□□□□□ -0.14
CLN6Q9NWW5 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 CICP11-201ENST00000434745 2827 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AC105233.2-201ENST00000523697 349 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AF228730.5-201ENST00000530288 346 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AP001005.1-201ENST00000571755 1248 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AC011467.4-201ENST00000594891 528 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AC104692.2-201ENST00000603054 253 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 BEND3P1-201ENST00000421591 1944 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 AC027601.5-201ENST00000624065 2482 ntBASIC14.15□□□□□ -0.14
CLN6Q9NWW5 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CLN6Q9NWW5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.15□□□□□ -0.15
CLN6Q9NWW5 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
CLN6Q9NWW5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.14□□□□□ -0.15
CLN6Q9NWW5 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms