Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 PLGLB2-201ENST00000359481 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 SNORD116-8-201ENST00000384365 95 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC006153.1-201ENST00000480135 371 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 UBE2D2-208ENST00000511725 656 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 OR4R3P-201ENST00000525084 838 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC012236.1-202ENST00000558388 1024 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC009090.1-201ENST00000562409 358 ntTSL 3 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 LINC00557-201ENST00000563184 1279 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC004449.1-201ENST00000564240 433 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 MIR3197-201ENST00000582241 73 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC011467.4-201ENST00000594891 528 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC105339.1-204ENST00000636249 355 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC099654.10-201ENST00000640395 161 ntBASIC18.62■□□□□ 0.57
RNF216Q9NWF9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CPB1-201ENST00000282957 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CTXN3-202ENST00000395322 1458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
RNF216Q9NWF9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 LINC02139-201ENST00000612023 2005 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC022486.1-201ENST00000510613 1483 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 E2F3P2-201ENST00000447755 1422 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC016956.1-201ENST00000393026 1108 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 UQCRFS1P3-201ENST00000407697 385 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC009518.2-201ENST00000418056 731 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 LINC01823-203ENST00000435895 766 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 DUTP3-201ENST00000450025 415 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 BAALC-AS1-202ENST00000500902 993 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 MLIP-209ENST00000509997 1032 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 ARHGEF38-IT1-201ENST00000512262 456 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC093297.2-202ENST00000514597 659 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC090095.1-201ENST00000519275 871 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 MTCYBP41-201ENST00000528913 1123 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 TBCB-207ENST00000586868 466 ntTSL 3 BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AC245036.5-201ENST00000596330 847 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 AP003973.1-201ENST00000604639 691 ntBASIC18.61■□□□□ 0.57
RNF216Q9NWF9 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RNF216Q9NWF9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms