Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 DPM3-202ENST00000368399 517 ntBASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 RN7SL574P-201ENST00000581512 297 ntBASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 U62317.3-201ENST00000608319 855 ntBASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRMT13Q9NUP7 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 AC008894.3-201ENST00000624324 3103 ntBASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 REXO1L5P-201ENST00000622260 2098 ntBASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRMT13Q9NUP7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 HLA-K-203ENST00000430151 1046 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 RPS2P36-201ENST00000456516 831 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TMEM198B-204ENST00000484016 896 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 MIR3907-201ENST00000579424 151 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 MIR4683-201ENST00000579659 81 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 AC128714.1-201ENST00000637035 887 ntBASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRMT13Q9NUP7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 MIR33B-201ENST00000385104 96 ntBASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.75■□□□□ 0.27
TRMT13Q9NUP7 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms