Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM1Q9HBL6 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AC015922.1-201ENST00000421102 1152 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AP006288.1-201ENST00000446065 395 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 HLA-V-204ENST00000476601 1289 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AF228730.6-201ENST00000641497 218 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AC084121.3-201ENST00000641716 218 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 REXO1L2P-201ENST00000425429 2069 ntBASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 COCH-203ENST00000460581 2688 ntTSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.89□□□□□ -0.03
LRTM1Q9HBL6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RPL13P2-201ENST00000440687 659 ntBASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 SNHG9-202ENST00000564014 471 ntBASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AP000845.1-201ENST00000581677 2131 ntBASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AC027612.4-201ENST00000605371 583 ntBASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 LINC00552-201ENST00000625151 2579 ntBASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.88□□□□□ -0.03
LRTM1Q9HBL6 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms