Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 GK-202ENST00000378941 458 ntTSL 3 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AC015922.1-201ENST00000421102 1152 ntBASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AC092580.3-201ENST00000430932 139 ntBASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 AC105233.6-201ENST00000642093 218 ntBASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ACE3P-201ENST00000423435 1973 ntBASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
UPF3BQ9BZI7 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 AC139749.1-202ENST00000617529 3139 ntBASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 AC027369.6-201ENST00000525520 931 ntBASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
UPF3BQ9BZI7 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
UPF3BQ9BZI7 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.54
UPF3BQ9BZI7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UPF3BQ9BZI7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
UPF3BQ9BZI7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AC107890.1-201ENST00000422478 521 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AC069120.2-201ENST00000524091 540 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AC044860.1-202ENST00000559481 777 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AL844908.2-201ENST00000609461 460 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 AC074044.1-201ENST00000609673 707 ntBASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
UPF3BQ9BZI7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms